PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942102.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 356aa MW: 39683.7 Da PI: 6.3486

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942102.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.7	2.7e-29	132	192	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK++ g+++prsYYrCt++ +C++ k+v+rs+edp+v+eitY+g+H+++ XP_022942102.1 132 EDGYSWRKYGQKDILGATYPRSYYRCTFRntqNCWAVKQVQRSDEDPSVFEITYRGKHTCS 192 8************************998889************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MEGGWSWDQT SLVGEIIQGM ELTKQLRAEL SSASTEESRG SLIQGILSSY ERALLILKRN 60 APMNQPPMPE VAPGLPGSPI SVNGSASSDD SGRGLKDPQQ DPRKESKKRK TQPRWKVQVK 120 VNSETGFEGP HEDGYSWRKY GQKDILGATY PRSYYRCTFR NTQNCWAVKQ VQRSDEDPSV 180 FEITYRGKHT CSQGNYLAQS CHSPEKQENK ENDHGHDHHQ KQPAQESLFG NQTIENIEKL 240 KNKASTFCFG STSGGCKDIV NGGFSHLAID THTALGSFSQ SFISPTTPDS NYFTPSPCQR 300 SNIGGTHNMQ PLESDVYEIF SANTSATNSP ILDWDFPFDS EQINSNFPFN SPGFFY

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MEGGWSWDQT SLVGEIIQGM ELTKQLRAEL SSASTEESRG SLIQGILSSY ERALLILKRN  60
APMNQPPMPE VAPGLPGSPI SVNGSASSDD SGRGLKDPQQ DPRKESKKRK TQPRWKVQVK  120
VNSETGFEGP HEDGYSWRKY GQKDILGATY PRSYYRCTFR NTQNCWAVKQ VQRSDEDPSV  180
FEITYRGKHT CSQGNYLAQS CHSPEKQENK ENDHGHDHHQ KQPAQESLFG NQTIENIEKL  240
KNKASTFCFG STSGGCKDIV NGGFSHLAID THTALGSFSQ SFISPTTPDS NYFTPSPCQR  300
SNIGGTHNMQ PLESDVYEIF SANTSATNSP ILDWDFPFDS EQINSNFPFN SPGFFY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	110	PRKESKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	6e-62	WRKY family protein