PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942104.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 278aa    MW: 31206.5 Da    PI: 9.8302
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942104.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.6e-1991141256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  XP_022942104.1  91 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 141
                     59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MVNKMQQQLN NSQFFTTLDS IFSRSLPSTA VALSPMPETA MGSSVYLRQR DLVHKFCVEN  60
HHLQLQRQHR YQPVEISAGY GGFPASEKKK LYRGVRQRHW GKWVAEIRLP QNRMRVWLGT  120
YDTAEAAAYA YDRAAYKLRG EYARLNFPNL KEFRNLGFAD CGRLNALKNS VDAKIQAICS  180
KIKRERAKKR SKKLDPKNIP VSESSSPSVM AATWCSSAVS EDGFWRTDNS PPPPSSSSGS  240
AESAVTVAMV VEGDCEGYSS LAKMPSFDPD LIWEVLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.17e-59ERF family protein