PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942126.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YB
Protein Properties Length: 236aa    MW: 26012.1 Da    PI: 6.6703
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942126.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB181.66.4e-5790186197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdr+lPian+srimkk+lPan+ki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy++plk yl++yrele 
  XP_022942126.1  90 VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKSYLTRYRELEC 184
                     69********************************************************************************************9 PP

           NF-YB  96 ek 97 
                     + 
  XP_022942126.1 185 DA 186
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MSVFFSNVRS SFSFKNIYSA NLHSSFSTFR SSFAIFFILS LSLCAPNTNS LIFPSSLWIP  60
DLPHMADPPT SPAGGSHESG GEQSPHTGGV REQDRYLPIA NISRIMKKAL PANGKIAKDA  120
KDTVQECVSE FISFITSEAS DKCQKEKRKT INGDDLLWAM ATLGFEDYID PLKSYLTRYR  180
ELECDAKGSS RGGEESAKRD AVGALPGQNS QQYLQPGALT YINTQGQHFD RSFNAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.14e-76NF-YB family protein