PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942213.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 431aa MW: 46717.1 Da PI: 7.4842

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942213.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.9	3e-37	37	139	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg..... 88 +g+kdrhsk++T++g RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak++i+el+++++ ++s + ++ ++++s + ++++ XP_022942213.1 37 TGRKDRHSKVCTAKGTRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKASIDELAELPAWNPSTAnasTQRQEQQSLNDENESllsvq 131 79**************************************************************5555533321233333333333333355554 PP TCP 89 .......k 89 XP_022942213.1 132 rdvfsptG 139 44443331 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MGESHRQTAT SSRLGMRTGG GGGEIVEVQG GHIVRSTGRK DRHSKVCTAK GTRDRRVRLS 60 AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KASIDELAEL PAWNPSTANA STQRQEQQSL 120 NDENESLLSV QRDVFSPTGN RRASVVGSHS RVSEFPLQNL QHTQMGGGPN NSTSGFLPPS 180 LDSDSIADTI KSFFPIGTAA AETTSSSIQF QNFSQDLLSR TSSQNQDLRL SLQSFQDPIA 240 IHRHHHAQHQ NQGHQNDHVL FPGTATLTGF DVTTAGWSEH NNLNPAEISR FPRITSWNAS 300 GAEIGSSGSS GHGGAAIRSA GYVFNSPHLS TALPPSSLMQ PLFGENQFFS QRGPLQSSNT 360 PSIRAWIDQS LTATDHQQHH MPPSIHQSSY TSLGFASGGF SGFHIPTRIQ GDEEHNGISD 420 KPSSASSDSR H

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MGESHRQTAT SSRLGMRTGG GGGEIVEVQG GHIVRSTGRK DRHSKVCTAK GTRDRRVRLS  60
AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KASIDELAEL PAWNPSTANA STQRQEQQSL  120
NDENESLLSV QRDVFSPTGN RRASVVGSHS RVSEFPLQNL QHTQMGGGPN NSTSGFLPPS  180
LDSDSIADTI KSFFPIGTAA AETTSSSIQF QNFSQDLLSR TSSQNQDLRL SLQSFQDPIA  240
IHRHHHAQHQ NQGHQNDHVL FPGTATLTGF DVTTAGWSEH NNLNPAEISR FPRITSWNAS  300
GAEIGSSGSS GHGGAAIRSA GYVFNSPHLS TALPPSSLMQ PLFGENQFFS QRGPLQSSNT  360
PSIRAWIDQS LTATDHQQHH MPPSIHQSSY TSLGFASGGF SGFHIPTRIQ GDEEHNGISD  420
KPSSASSDSR H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	7e-80	TCP family protein