PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942274.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 278aa MW: 32931.1 Da PI: 9.1096

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942274.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.1	1.2e-18	14	102	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++e+++ i++r ++e++l + +kk+lW+ s++mrergf r++ qCk+kw+nl ryk +++ k+ +cp+f++++ XP_022942274.1 14 QWSEEETREFIRIRADLERDLTVVStgegaavKKKTLWDMASARMRERGFWRTAYQCKCKWKNLLSRYKGKETTHKE----FGWQCPFFEEIR 102 7*****************996433446677**********************************9999997....4668**9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MTSSAMAATA QQHQWSEEET REFIRIRADL ERDLTVVSTG EGAAVKKKTL WDMASARMRE 60 RGFWRTAYQC KCKWKNLLSR YKGKETTHKE FGWQCPFFEE IRAVFAVREK AMHRLLHEPE 120 AGSSATKKRG RERSLEEYSE LKELDEEESE EEIPTQSNSQ KGKAIGTHPA KSSRTAGSKS 180 SSSSVSNEIL ELLKGFFQWQ QRMEMEWREI LERHYNNRRM FEQEWRDSME KLVRERLMAE 240 KAWREREEQR KKRQDIRAEG MDALLTDLLN KLNRENNL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	244	253	REREEQRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	7e-26	Trihelix family protein