PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942308.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SRS

Protein Properties

Length: 266aa MW: 29109.6 Da PI: 7.7352

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942308.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	103.7	3.2e-32	79	143	5	69
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaae 69 +sCqdCGnqakkdC h+RCRtCCksrgfdC+thvkstWvpa+krrer+ + ++ k+ +++++ XP_022942308.1 79 VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTA 143 579*********************************************88877777666666554 PP
2	DUF702	84.7	2.3e-26	141	203	93	155
DUF702 93 saeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGleek 155 ++ +++ le++++P evss+avfrcvr++++d+ ++++aYqtav+igGh+fkGiLyd+G+e++ XP_022942308.1 141 NTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQ 203 555677899999************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MAGFFPLGGG REPNYHLPTT TTTTTDGLFW YRNYESLGIW QQQQVQQQAG EGFVYSGDES 60 PPRSSLVMLR SGRNGGGQVI SCQDCGNQAK KDCLHMRCRT CCKSRGFDCE THVKSTWVPA 120 SKRRERHLRS DGTNLKRPRD NTAASSGLEM RNFPVEVSST AVFRCVRMTT LDETNDQFAY 180 QTAVNIGGHT FKGILYDHGP EQQQQPPPPP PNSASPDGGA LLITAPSTTM ELPPISAALL 240 DPPPPYPAPL NTYVAAGTQF FLPPTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	7e-52	SRS family protein