PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942320.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 170aa    MW: 18908.3 Da    PI: 9.0673
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942320.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.42.7e-3291149159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk s++prsYYrCt+++C+vkk+++r ++dp++v++tYeg Hnh+
  XP_022942320.1  91 LDDGYRWRKYGQKAVKHSTYPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHP 149
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MASSSTVNYQ SSDAAEIDWV GIFGGSSDVS LEMEKGSGVS EGAIMAMGDC NYQNESHVHV  60
HGGKNKGKMA MGKRGAIPRV AFQTRSAEDV LDDGYRWRKY GQKAVKHSTY PRSYYRCTHH  120
TCNVKKQIQR HSKDPTIVVT TYEGIHNHPS EKLMETLTPL LKQLQFLSGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41570.13e-56WRKY family protein