PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942450.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 196aa    MW: 22602.9 Da    PI: 8.6551
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942450.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox603.8e-1965119256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tkeq + Le+ F++n++++ +++e LA+ l+L+ rqV vWFqNrRa+ k
  XP_022942450.1  65 RKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLKLKPRQVEVWFQNRRARSK 119
                     78889************************************************98 PP
2HD-ZIP_I/II115.53.2e-3765153190
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                     +kk+rl+keq++lLE+sF+++++L+p++K++la+ L+l+prqv+vWFqnrRAR k+kq+E+++e+Lkr++  l+e+n++L+keveeLr +
  XP_022942450.1  65 RKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGLLTEQNKKLQKEVEELR-A 153
                     69*************************************************************************************9.4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MAVLPTNSSR LDLTISVPGF TSFSSSPLPP SAVRDLDMNR APDEEEWMMG SMEEDEENNS  60
GSHPRKKLRL TKEQSHLLEQ SFRQNHTLNP KQKETLAEVL KLKPRQVEVW FQNRRARSKL  120
KQTEMECEYL KRWFGLLTEQ NKKLQKEVEE LRAMKVAPPT VISPHSCEPL PASNLTMCPR  180
CERVTTTTLD KTRIVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114122RRARSKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01430.12e-79HD-ZIP family protein