PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942494.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 235aa    MW: 25880.5 Da    PI: 5.9114
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942494.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-1080127454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL   l +    ++ K +Ka+iL  Av+ + +L
  XP_022942494.1  80 SKACREKLRRDRLNDKFLELSATLEPG---RALKTDKAAILIDAVRMVTQL 127
                     6789**********************9...9***************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MVSPETTNWL FDYALIDDIP VPDDVNFSAP TAGFSWSMQP FNASSDVSAE IEGSLLESDG  60
LKEPGSKKRV RTESSCASSS KACREKLRRD RLNDKFLELS ATLEPGRALK TDKAAILIDA  120
VRMVTQLRGE AQVLKDSNTS LLEKIKDLKA EKNELRDEKH RLKLEKEKLE QQLKATNSQP  180
GFMPPAIPAT FAAQGQAPGN KLVPFIGYPG VAMWQFMPPA AVDTSQDHVL RPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-92bHLH family protein