PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942674.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 309aa    MW: 36197.6 Da    PI: 6.1092
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942674.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.49.2e-5671361129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeelv++yL+kk+++++++l +vik+vd+yk+ePwdL++  ++ a +++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++
  XP_022942674.1   7 VPPGFRFHPTDEELVDYYLRKKISSRRIDL-DVIKDVDLYKIEPWDLQEicNLGAeDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKTI 100
                     69****************************.9***************954533332566************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     +s k+ l+g++ktLv+ykgrap+g+k+dW+mheyrle
  XP_022942674.1 101 YS-KHDLIGMRKTLVYYKGRAPNGQKSDWIMHEYRLE 136
                     **.8899****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MNTFLDVPPG FRFHPTDEEL VDYYLRKKIS SRRIDLDVIK DVDLYKIEPW DLQEICNLGA  60
EDQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKTI YSKHDLIGMR KTLVYYKGRA  120
PNGQKSDWIM HEYRLETDEN GAPQQEGWVV CRVFKKRIAT VNRRMNEHES PCWYDEPVAA  180
IMPDLDSPSF PQHLSNYFPC KKEMDLTNYQ PQQHFLHLPL LESQKLVQSA SNYQPSPPKQ  240
QLSDQNLLFL FDNNNNNNEQ TADQLTDWRV FDKYVASQLS QENASKQELI VPENAPTSTS  300
TSCQIELWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-98NAC family protein