PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942687.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 254aa    MW: 28438.8 Da    PI: 5.4184
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942687.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.49.4e-31120178259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D + WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers +dp+++++tY+ eHnh 
  XP_022942687.1 120 SDSWGWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSFSDPNIFVVTYTAEHNHA 178
                     79*************************998****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MEDWDLQAIV KGCSSRPTSM LQDPFFSFLS EEDDFSCDFS SSSSCSSHEF EGFGSSIFPV  60
FHPLIPYPNN SAAISDLLGE FKEPQKLLQK KQISAIKQKQ SKKSRQNRVV KEVKADGVCS  120
DSWGWRKYGQ KPIKGSPYPR SYYRCSSSKG CSARKQVERS FSDPNIFVVT YTAEHNHAEP  180
TRRNALAGTT RKKFPAPENP SFDVILSPND STCVASIEEE QPMEGVGEGG VLMHIPFEFS  240
SEDLFTGLED LLFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.13e-30WRKY family protein