PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942733.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 203aa    MW: 21956.3 Da    PI: 7.1211
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942733.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260130.95.6e-41521511100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+C ++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe +r+da+ss+vyeA+ar+rdPvyG++g i +lq q+++l+a+la
  XP_022942733.1  52 PCAACKILRRRCIEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARVRDPVYGSAGAICQLQTQVSELQAQLA 146
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022942733.1 147 KARAE 151
                     99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MAYVAKCTSS PPTPTTLPNP PLSSSAAAAT TNFVSPPTSQ QSSTPVAVVL SPCAACKILR  60
RRCIEKCVLA PYFPPTEPLK FTIAHRVFGA SNIIKFLQEL PECQRTDAVS SMVYEANARV  120
RDPVYGSAGA ICQLQTQVSE LQAQLAKARA EVANMQQQQA NLLALICMEM KQSAEPLWAS  180
HLADTTCFLD DATLSAPWEP LWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.11e-66LBD family protein