PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942751.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 302aa    MW: 33750.6 Da    PI: 5.2646
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942751.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-19100150155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r++lg++ taeeAa  +++a+ +l+g
  XP_022942751.1 100 KKFRGVRQRP-WGKWAAEIRDPL----RrVRIWLGTYNTAEEAAMVYDNAAIQLRG 150
                     59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MEGMDLFSSL LVPSVKYSEH RNHTKHFSPP LMAPKLVRIS VTDEDATDSS SDEKEEEQHV  60
SRRVKKFITE ITIEALGRRD RKKSTAGKSN LRKPLQPGTK KFRGVRQRPW GKWAAEIRDP  120
LRRVRIWLGT YNTAEEAAMV YDNAAIQLRG PTAQTNFSPP PAVSSSNVSV EETNDNLSSP  180
TSVLRCPSPS TNEKSPETAS TGKETRRAES EIFPDVSFCS NCDSFYPNDI FDFQPPIPSL  240
FGDTALNDAV LRGDYGSSMF INPDDDFGFE LGFGFRPSTW HMSENSFQDI SDIFGSDPLI  300
AL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.19e-51ERF family protein