PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942790.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 183aa MW: 20172.4 Da PI: 8.1365

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942790.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.6	9.8e-05	72	94	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F+++ L H++ H XP_022942790.1 72 FECQYCLKEFRNSQALGGHQNAH 94 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MGKNSSSYNL EEHESGLFAS TSNVEKKVKL FGFELNPSKN HELGSSSCLN GEGDESVNSS 60 TTVCFERAEP KFECQYCLKE FRNSQALGGH QNAHKKERLK KKKEKMELQA TNASLTYLLY 120 THNSSQISFS QNGAKFIHFD GSVPPADKAV GYVSSSSSSS SSLPVCNDHR RSCKSLDLQL 180 GFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	103	ERLKKKK
2	98	104	RLKKKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10480.1	4e-12	C2H2 family protein