PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942808.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 411aa    MW: 45774.9 Da    PI: 7.4605
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942808.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.000313063401655
                     HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     i +++ +L++++ +      +K + a++L +++ YIk Lq
  XP_022942808.1 306 IGDRITTLQQIVSPF-----GKTDTASVLNETIGYIKFLQ 340
                     778999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MADDCTDTSV ATSSTPPNWW DTHNHHHHHY NSSSSCDDDV SISTSSFTNA SNHSALTLDS  60
SSAAAAAAHL LPHHASDHHL WTQVLLNIGN GVEDIQPNFL EPIACSDYLK KMDTNTNWDD  120
TFQTFNNNNG LLTTLENERL LKLSNLVNTW SIALPSPDAH LRHLMDQEPH PLRPTTLLDP  180
DAALDPCASA FFRRSLHNPM PAKPFYDNHT ATTRNYGDYI SFNPRFAKPL LGVNPSIKSL  240
NLSAQSKKQI QQISSPTRGS GRGSGVLNEG KKKRSEESSE TVTKKAKQDN SATPASTKIQ  300
QPKVKIGDRI TTLQQIVSPF GKTDTASVLN ETIGYIKFLQ EQVQLLTNPY MKANSYKDAW  360
QSLERKESKG EGKMELRSRG LCLVPISCTP QVYRENSGSD YWTPYRGCFY R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.12e-41bHLH family protein