PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942846.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 265aa    MW: 28544.5 Da    PI: 8.6665
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942846.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.42.6e-20127161135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  XP_022942846.1 127 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 161
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MMHHCGGGAG GAASSFSVFL SVPNHGGAAH DMMDIYSNNY ASSSSSSSSS PSSVDCTLSL  60
GTPSTRSSEF DSDKRAAPRH HRRSAGSYVS NFCWDLLHPK HKSAGRSTAS NAAAVPSGGD  120
PLLARRCANC DTTSTPLWRN GPRGPKSLCN ACGIRFKKEE RRAAATVNCT ATAMAAESNN  180
HHHLHQHHQM FNGNYTNSTA AWVPHHSPVA TQKLPCLSAA AINNESMFIG NDDVRRTEQE  240
NGISYLSWRL NVTDHRPSLV HDFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.14e-49GATA family protein