PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942861.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 293aa    MW: 32327.2 Da    PI: 4.8758
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942861.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.91.3e-112152551055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le+AveY+k Lq
  XP_022942861.1 215 RKRRERINERLKILQSLVPNG-----TKVDISTMLEEAVEYVKFLQ 255
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MEPIAEREWI SEESDFMANL LSNYCLPNEL SSDLSLEIPC AYWESNEPPS LSMAAMDEPS  60
YYSSDSLPLW LPNGASLSLD FSMEDDRLDD NGSSRKTRQC RLQHSLADPA AAAVAVNGKK  120
RKAEIHEKVA SMSVVENSKK RNARPPKIMK LGSASCNDED HIGQCTSSFS SEESQEINGG  180
ISSSSSSKGS ASLTSNGKPR ASRGSATDPQ SLYARKRRER INERLKILQS LVPNGTKVDI  240
STMLEEAVEY VKFLQLQIKL LSSDDLWMYA PIAYNGMDIG LNLKLMKQDN ASQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-55bHLH family protein