PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942903.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 324aa    MW: 35453.4 Da    PI: 6.7144
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942903.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.27.1e-33164222159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers++d ++v++tYeg+H+h+
  XP_022942903.1 164 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQ 222
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MEKKFEDSLM GSATSTGIYS QTVFSDEFSV GGSGFSGVFD LPCDDDHKAS CSSSSSFDLF  60
GGGIGFHDFY NPSSMFDLLS TTAPPLQPPL SSPSSTVPES SEVLNAPTTP NSSSVSNSSS  120
NEAAPIEEVD KNAKTSKVLK PKKNQKKQRE PRFAFMTKSD IDHLDDGYRW RKYGQKAVKN  180
SPYPRSYYRC TTSQCGVKKR VERSSSDHSI VITTYEGQHT HQSPVMPRGS IRILSESTNC  240
LVADHDVATT GILFQHNIPG QPFMYNPPQP FLTNDSSFLS PRPPPSSLPP PSLSSRASLL  300
QDNGLLQDLV PLQVRKEPKD EQNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.11e-46WRKY family protein