PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022942911.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family DBB
Protein Properties Length: 260aa    MW: 28898.8 Da    PI: 6.3346
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022942911.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.52.3e-07447542
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                     C+ +e  e++  C  ++  lC  C +++H        H++vpl
  XP_022942911.1  4 QCNVCEMAEATVLCCADEAALCWACDENIHAAnklaskHQRVPL 47
                    7******99*********************66899999999986 PP
2zf-B_box29.81.3e-095295138
        zf-B_box  1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                    s++++C+ ++e    +fC +++ llC++C +++H        H+
  XP_022942911.1 52 SQMPRCDICQEASGYIFCLEDRALLCRKCDVAIHTAnayvtgHQ 95
                    689*******************************5455666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MKIQCNVCEM AEATVLCCAD EAALCWACDE NIHAANKLAS KHQRVPLSGS SSQMPRCDIC  60
QEASGYIFCL EDRALLCRKC DVAIHTANAY VTGHQRFLLT GVKVALEPTD PVPCSSIANS  120
HSREISTKTK VRPPSDKEFS MPSSGELSRS LSVQGGSDDF MTNRTLLTGD SASGGFSQWQ  180
IDELINLTGF NQNYGFMDNG SSKIDRDWRE TELILRHDTL VMGEFLHVMI LSYPHRLTAK  240
KWTDWRLIVE SLGTPTHHQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78600.11e-76DBB family protein