PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022942976.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 480aa MW: 54099.7 Da PI: 8.3009

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022942976.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.8	3.6e-17	79	169	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+kv++ps+ + +l lp+ f+++h +++++ ++l+desg +++ k+ +k++ l++GW++F a++L++gD++vF l+ ++f +v XP_022942976.1 79 FIKVMLPSHITGGFWLGLPRGFCDSHL--PRQDTAMILQDESGMTFQTKYLSEKTG----LSAGWRGFSLAHNLQQGDVLVFLLVMPNKF--MVY 165 89**********************5..457889***********444444....*********************9765666..999 PP EE-S CS B3 96 vfrk 99 ++r+ XP_022942976.1 166 IVRS 169 9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MNRGRPRKEK MLRRKSWASI TPPGTSYDQE TAQSFSHPRS VKFKRTTIDS IYNDRQSRSI 60 VMAQAKEVQA KLPPGFPSFI KVMLPSHITG GFWLGLPRGF CDSHLPRQDT AMILQDESGM 120 TFQTKYLSEK TGLSAGWRGF SLAHNLQQGD VLVFLLVMPN KFMVYIVRSN AVAEDGGAPG 180 FEPVYIVRSN AVAEDGGAPG FERRAYNKQT PLYSKENVPY MKEKQMALDN VTSKEADIHP 240 VKIEEDDNPV SLAIDIHKDH GQTSRPVHND TEMMPVLEEC ENNRNSFGSN STNGIRLSNY 300 TPDFNKVKSL NDFIISVNGL VIDSEFSSHV RAKYFELCSS QKAFLHEHIL EGLNYKLVSG 360 IISETINIAD AIRACKVGIT SQEHYITWDK SLTAFEGLGM NVAFLRSRIY RLLTLSIKIE 420 MKRKMELKRD STQEEVRMLV AKIMEARSVV KQLEAEIQSL ENTDGGNMEA LFKEVASAPW

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MNRGRPRKEK MLRRKSWASI TPPGTSYDQE TAQSFSHPRS VKFKRTTIDS IYNDRQSRSI  60
VMAQAKEVQA KLPPGFPSFI KVMLPSHITG GFWLGLPRGF CDSHLPRQDT AMILQDESGM  120
TFQTKYLSEK TGLSAGWRGF SLAHNLQQGD VLVFLLVMPN KFMVYIVRSN AVAEDGGAPG  180
FEPVYIVRSN AVAEDGGAPG FERRAYNKQT PLYSKENVPY MKEKQMALDN VTSKEADIHP  240
VKIEEDDNPV SLAIDIHKDH GQTSRPVHND TEMMPVLEEC ENNRNSFGSN STNGIRLSNY  300
TPDFNKVKSL NDFIISVNGL VIDSEFSSHV RAKYFELCSS QKAFLHEHIL EGLNYKLVSG  360
IISETINIAD AIRACKVGIT SQEHYITWDK SLTAFEGLGM NVAFLRSRIY RLLTLSIKIE  420
MKRKMELKRD STQEEVRMLV AKIMEARSVV KQLEAEIQSL ENTDGGNMEA LFKEVASAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	6e-39	B3 family protein