PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022943150.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 357aa MW: 39840.5 Da PI: 8.3941

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022943150.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.7	4.5e-53	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfF++r++ky++g r+nra++sgyWkatg+dk+vl++ XP_022943150.1 15 LPPGFRFHPTDEELVVHYLKKKANSAPLPV-AIIAEVDLYKFDPWELPAKASFGEQEWYFFTPRERKYPNGARPNRAATSGYWKATGTDKPVLAT 108 79**************************.88***********999999************************************9 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg kt+W+mheyrl XP_022943150.1 109 ggSNQKVGVKKALVFYGGKPPKGIKTSWIMHEYRL 143 877788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MESIDSSAGP PQPNLPPGFR FHPTDEELVV HYLKKKANSA PLPVAIIAEV DLYKFDPWEL 60 PAKASFGEQE WYFFTPRERK YPNGARPNRA ATSGYWKATG TDKPVLATGG SNQKVGVKKA 120 LVFYGGKPPK GIKTSWIMHE YRLADNKPNI NKPPGYDFPN KNSWKLDDWV LCRIYKKNSS 180 HRGGMDEERE DSLGEMMMGS IPPSSMRLNH EYPKLGMNYH TAFLQNDPNM VRGIMGANTD 240 TAGLDINNAA NSKQAPNSLF WATEEQEEDH SGISSNKRLH FDNSTSGGAS TSFTRTSHSI 300 IDGNPQNSTS SLPTLLTNLP HQTPPPSNNH HRHTLFASLP DALFRPAYQI PDANWYT

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MESIDSSAGP PQPNLPPGFR FHPTDEELVV HYLKKKANSA PLPVAIIAEV DLYKFDPWEL  60
PAKASFGEQE WYFFTPRERK YPNGARPNRA ATSGYWKATG TDKPVLATGG SNQKVGVKKA  120
LVFYGGKPPK GIKTSWIMHE YRLADNKPNI NKPPGYDFPN KNSWKLDDWV LCRIYKKNSS  180
HRGGMDEERE DSLGEMMMGS IPPSSMRLNH EYPKLGMNYH TAFLQNDPNM VRGIMGANTD  240
TAGLDINNAA NSKQAPNSLF WATEEQEEDH SGISSNKRLH FDNSTSGGAS TSFTRTSHSI  300
IDGNPQNSTS SLPTLLTNLP HQTPPPSNNH HRHTLFASLP DALFRPAYQI PDANWYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-102	NAC family protein