PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943235.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 312aa    MW: 35563.2 Da    PI: 6.8527
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943235.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.21.7e-121257146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqk 46
                     +g+W+ eEde l ++v+++G+++W++  r  g + Rt+k+c++rw +
   XP_022943235.1 12 KGPWSVEEDEVLMNYVNKFGPRDWSS-LRSKGlLPRTGKSCRLRWVN 57
                     79************************.66667788**********87 PP
2Myb_DNA-binding42.21.9e-1365106346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++++E+   +++ +q+G++ W++Ia +++ gRt++++k++w +
   XP_022943235.1  65 TFSADEERVVIELQAQFGNK-WAKIATYLP-GRTDNDVKNFWST 106
                      699*****************.*********.***********65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MERKRDGTQM KKGPWSVEED EVLMNYVNKF GPRDWSSLRS KGLLPRTGKS CRLRWVNKLQ  60
PNLKTFSADE ERVVIELQAQ FGNKWAKIAT YLPGRTDNDV KNFWSTRRKR LGRILQTPPQ  120
KSQKHNQKIS ESRRLHHVLP DLEVPTSVSS QLEKRSSTWN DHFENEFELG NAEMHKMASL  180
SVQSNMIAME TENQIFGTPS IHMLAPFDPF PHCCISQITQ SSQGIGMVPD CLGLAPHHIA  240
SNLQDGLEPG QTSKIESSLQ FMSSSMPKEQ DMKAESSLEV ENGNPYHATV VDCFDDFSAD  300
LFDFFYQPPP SF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.11e-60MYB family protein