PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022943357.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 255aa MW: 27726.4 Da PI: 10.0202

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022943357.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.8	2.8e-19	9	54	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed+ l ++v+++G+++W++I++ ++ gR++k+c++rw++ XP_022943357.1 9 KGPWSPQEDQALRRLVRKYGPRNWSLISKSIP-GRSGKSCRLRWFNQ 54 79****************************.*********996 PP
2	Myb_DNA-binding	53	7.9e-17	63	105	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a +++G++ W+tIar + gRt++ +k++w++ XP_022943357.1 63 AFTAEEDEMIINAQALYGNK-WATIARLLS-GRTDNAIKNHWNST 105 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MAKEIDRIKG PWSPQEDQAL RRLVRKYGPR NWSLISKSIP GRSGKSCRLR WFNQLSPQVE 60 HRAFTAEEDE MIINAQALYG NKWATIARLL SGRTDNAIKN HWNSTLKRKS GGCNTSSPPL 120 KSPSESDVSD SSFFPGVSSS HVYRPVARSG GVVPPCETVS SSNDPLTSLS LSLPGAESSE 180 EKSVAGMGGV WAEERNKKGF EIGGSDLMGV MQEMIRKEVR KYMGGLMEQS VGGGVCVQQA 240 AAGGFRNFVS VSKSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	3e-71	MYB family protein