PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943422.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 350aa    MW: 37789.9 Da    PI: 6.6589
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943422.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.14.3e-17269302134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs+C +  Tp+WR gp+g ktLCnaCG++y++ +
  XP_022943422.1 269 CSHCLVQRTPQWRTGPNGAKTLCNACGVRYKSGR 302
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MECLEAKALK SSFHWELAMK FAQPDAMVEE GGCSNGADLV AGEDFEVDEF LNFSNGDFEH  60
GSALRVQEDD DYEEFEKNRL SVSPYSNQSG GISTAGEEGS KAVVAVELAI PNQNQNQNRN  120
PTSQGDALAD LEWVSQFVDD SGSEYSCAAV SLNRSKPEKK LTGAVISCLP TSFPVKPRTK  180
RPRQSRQAKS NSSSLNQSSS SSSLSSSSGV SSAAPWFIFS DASENVDYLN VSGEPTKKQR  240
KKSSSSATAT AAAAVLQPVG PTGQIPRRCS HCLVQRTPQW RTGPNGAKTL CNACGVRYKS  300
GRLFPEYRPA LSPTFCSGIH SNSHRKVLEM RKTKEVPEPA SDLAPMVPSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.25e-46GATA family protein