PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943423.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 337aa    MW: 36265.4 Da    PI: 6.365
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943423.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.24.1e-17256289134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs+C +  Tp+WR gp+g ktLCnaCG++y++ +
  XP_022943423.1 256 CSHCLVQRTPQWRTGPNGAKTLCNACGVRYKSGR 289
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MECLEAKALK SSFHWELAMK FAQPDAMVEE GGCSNGADLV AGEDFEVDEF LNFSNGDFEH  60
GSALRVQEDD DYEEFEKNRL SVSPYSNQSG GISTAGEEGS KAVVAVELAI PGDALADLEW  120
VSQFVDDSGS EYSCAAVSLN RSKPEKKLTG AVISCLPTSF PVKPRTKRPR QSRQAKSNSS  180
SLNQSSSSSS LSSSSGVSSA APWFIFSDAS ENVDYLNVSG EPTKKQRKKS SSSATATAAA  240
AVLQPVGPTG QIPRRCSHCL VQRTPQWRTG PNGAKTLCNA CGVRYKSGRL FPEYRPALSP  300
TFCSGIHSNS HRKVLEMRKT KEVPEPASDL APMVPSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.21e-49GATA family protein