PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943477.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 238aa    MW: 26297.1 Da    PI: 5.6968
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943477.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY536.6e-17131177259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s+fp           +vkk+vers+edp +v++tYeg+Hnh 
  XP_022943477.1 131 EDGYRWRKYGQKAVKNSPFP-----------SVKKRVERSSEDPCFVVTTYEGKHNHY 177
                     8*******************...........69************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MSNNEDHEKD PYYPNFEAFD PSNVGFYSDF LYDYNNFLST DIDISCSSSE AISPINDALK  60
KSLGLGESVA TGEHPSTPNS STTCSSVEAA AGGRDSAKSG EVKVDGRKKK EKREKGPRFA  120
FLTKSEIDNL EDGYRWRKYG QKAVKNSPFP SVKKRVERSS EDPCFVVTTY EGKHNHYCPI  180
TLRGHNVAGV YPPSASPSLI PARILAGEFY GGVDVQQQYY EVPGYGVLED LVNPKQNP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107112RKKKEK
2107114RKKKEKRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.11e-30WRKY family protein