PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943493.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 330aa    MW: 38054.2 Da    PI: 4.6526
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943493.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.41.1e-151663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++ Ed++l++ ++ +G ++W++ ++  g+ R++k+c++rw +yl
   XP_022943493.1 16 RGPWSPAEDLRLINFIQNYGHDNWRALPKQAGLLRCGKSCRLRWINYL 63
                     89******************************99************97 PP
2Myb_DNA-binding53.94.2e-1769114148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T++E+e +++++k +G++ W++Ia++++ gRt++++k+ w+++l
   XP_022943493.1  69 RGNFTPDEEETIIKLHKTWGNK-WSKIASRLP-GRTDNEIKNVWNTHL 114
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MGKGRAPCCD KNQVKRGPWS PAEDLRLINF IQNYGHDNWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDVKRG NFTPDEEETI IKLHKTWGNK WSKIASRLPG RTDNEIKNVW NTHLKKRLLK  120
TTTTKDCNEP KESPTTSSSS SSSLRPSNET QDLETERPNK TNSVNNDLFC LEQQTTSSLS  180
SNTSNSNSSS QVDKVWPQNH LDFGEEVEKK KENKQIRSEL ELELELELES IEIPLEWDKD  240
FWNILDLEDI DLFGSNEVDQ YYCQASNFEA EKRQEFENDK WFKYLENELG LEADGCTGLD  300
DVTAAERLLM DDVDPCMAYF ADGLTQQLQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79180.13e-70MYB family protein