PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022943535.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 424aa MW: 46955.9 Da PI: 6.8

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022943535.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.4	3.3e-28	148	202	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++v+SHLQkYR++ XP_022943535.1 148 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIECLTRHNVASHLQKYRSH 202 5689***************.******************************86 PP
2	Myb_DNA-binding	40.4	6.7e-13	151	200	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg + +t+ ++ s++qky+ XP_022943535.1 151 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiECLTRHNVASHLQKYR 200 57******************************999**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MLAVSPVRSG NKDEEQGEVE SFSIGGDDFP GFDDDTNLLD SINFDDFFVG INDGDVLPDL 60 EMDPEILAEF SVSGSEESEV NASVSLEKFE KDLDSRSCAQ GDQEIVSKRD ESATPRDIVE 120 VNDLVKHGDK IKNRKSSSQS KNSQGKRKVK VDWTPELHRR FVQAVEQLGV DKAVPSRILE 180 LMGIECLTRH NVASHLQKYR SHRKHLLARE AEAASWSQRR QMYGSASGGN AGKRELSPWS 240 APTMGFPPMT PMHPHFRPLH VWGHPTVDQS LMHVWPKHLP HSPSPPPPPT TPPSSWPHAA 300 APPPPPDWHH HHHHHHQRVP NALTPRTPCF PQPIPTTRFG GAAFSVIPPP HPMYKVEPTT 360 TVGRSPTHLP LDSYPSKESI DSAIGDALTK PWLPLPLGLK PPSLDSVKVE LQRQGIPKIP 420 PTCA

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MLAVSPVRSG NKDEEQGEVE SFSIGGDDFP GFDDDTNLLD SINFDDFFVG INDGDVLPDL  60
EMDPEILAEF SVSGSEESEV NASVSLEKFE KDLDSRSCAQ GDQEIVSKRD ESATPRDIVE  120
VNDLVKHGDK IKNRKSSSQS KNSQGKRKVK VDWTPELHRR FVQAVEQLGV DKAVPSRILE  180
LMGIECLTRH NVASHLQKYR SHRKHLLARE AEAASWSQRR QMYGSASGGN AGKRELSPWS  240
APTMGFPPMT PMHPHFRPLH VWGHPTVDQS LMHVWPKHLP HSPSPPPPPT TPPSSWPHAA  300
APPPPPDWHH HHHHHHQRVP NALTPRTPCF PQPIPTTRFG GAAFSVIPPP HPMYKVEPTT  360
TVGRSPTHLP LDSYPSKESI DSAIGDALTK PWLPLPLGLK PPSLDSVKVE LQRQGIPKIP  420
PTCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	9e-80	G2-like family protein