PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943621.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 300aa    MW: 34287.1 Da    PI: 8.9788
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943621.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.41.6e-50231472128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                      pGfrFhPtdeelv++yL++kv++++l+l e ik++diyk+ PwdLp++ + +ekewyfF+kr +ky+++ r+nr+t sg+Wkatg dk++++ +
  XP_022943621.1  23 LPGFRFHPTDEELVSFYLRRKVHNNPLPL-ELIKQIDIYKHSPWDLPRN-ALGEKEWYFFCKRGRKYKNSARPNRVTGSGFWKATGIDKPIYHDR 115
                     59***************************.89***************43.45899**************************************** PP

             NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                     + lvglkktLv+y+g+a k++kt+W+m+e+rl
  XP_022943621.1 116 SVLVGLKKTLVYYRGSAGKATKTQWMMNEFRL 147
                     ******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MAGSPSQFSD IAMNDDDDSQ SHLPGFRFHP TDEELVSFYL RRKVHNNPLP LELIKQIDIY  60
KHSPWDLPRN ALGEKEWYFF CKRGRKYKNS ARPNRVTGSG FWKATGIDKP IYHDRSVLVG  120
LKKTLVYYRG SAGKATKTQW MMNEFRLPSS SSSSSSSSAS LGEAEIWTLC RIFKRNISTR  180
KLNAPNWREV PAAKNRALEN MNFRTTSNRY SDANEQSSYI SFSSDYSFIS FSDQSQMTHG  240
GQSMRNFCSR SEQQPSGKRN SLANVSPSSS FSDFDEDATD LFGYEKWEEL KSILESDLDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.15e-77NAC family protein