PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943656.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 171aa    MW: 19729.5 Da    PI: 9.9057
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943656.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.53.6e-281059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien + rqvtfskRrng+lKKA+ELSvLC+aeva+iifss gkl e++s
  XP_022943656.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCEAEVALIIFSSAGKLCEFAS 59
                    8***********************************************86 PP
2K-box70.64.9e-24841701298
           K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                      ++     e+a+L keie+L+ ++R+l G++L+s s++eLqq+eqqL++sl ++R++K+e ++eqi++l++kek l  en++L kk+
  XP_022943656.1  84 PHHHDQADEAANLLKEIESLEVSKRKLFGQGLGSSSYEELQQIEQQLHRSLAHVRATKHEAYKEQIDQLKEKEKYLAAENEKLAKKM 170
                     56777889****************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCE AEVALIIFSS AGKLCEFASS  60
SMQATVERFQ RHTRETHHLE RSLPHHHDQA DEAANLLKEI ESLEVSKRKL FGQGLGSSSY  120
EELQQIEQQL HRSLAHVRAT KHEAYKEQID QLKEKEKYLA AENEKLAKKM K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.12e-74MIKC_MADS family protein