PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943691.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 148aa    MW: 16649.6 Da    PI: 10.465
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943691.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2575e-1878126153
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                     ++y+GVr++k +g+W+AeIrd + +   r+r++lg++ taeeA + ++  r+++
  XP_022943691.1  78 CRYRGVRQRK-WGKWAAEIRDpF-K---RARIWLGTYNTAEEASRVYESKRLEF 126
                     78*******9.**********55.3...5********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MSRKIRVICS DPDGTDSSSS ENERDETKSS KSKRIVREIH FPNFPSRASK SIDDEISRSS  60
SQDSNNGDKS FTNRGTACRY RGVRQRKWGK WAAEIRDPFK RARIWLGTYN TAEEASRVYE  120
SKRLEFQTAM AAAAAAPKPP AGSKLLIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.15e-31ERF family protein