PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022943958.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 368aa MW: 42035.6 Da PI: 8.624

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022943958.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	33.4	7.9e-11	10	66	36	96
EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 tl+ ++g +W+v l rk ++++++++GW +F + +++g +vF+++g+s f +v + XP_022943958.1 10 ATLTVPDGHVWRVGL--RKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAF--CVFI 66 68999********..********************************9998..6655 PP
2	B3	62	1e-19	245	335	4	98
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 vl ps+ + ++++lp fae++ +g++ ++l++++gr+W v++ y+ + r l++GW eF+ +n+L egD++vF+l + +e l+v++f XP_022943958.1 245 VLRPSYLYRGCIMYLPSCFAEKNlSGVSG---FIKLQTPDGRQWPVRCLYKVG--RAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVTMF 334 78899****************866743...5***********55555..566*********************98767776777777 PP - CS B3 98 r 98 r XP_022943958.1 335 R 335 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MIRDELSGVA TLTVPDGHVW RVGLRKVDNK FWFEDGWHGF LEHYSIRVGY LLVFRYEGNS 60 AFCVFIFNLN TSEINYQSAA LGGNQRNNYS IQNRIFEELE DYDIPEAIPS NQSMNSGSLR 120 NKLFGDEWNP HQSKSASTLQ AEYLSTRDIG VQFSAMEVKK SADEVRFQNL GDDVHRIKKS 180 GGKKRKPDSS EHHPSSAHSE DLGDIRFRFY ESASARKRTV TAEERERAIN SAKAFEPGNP 240 FCRVVLRPSY LYRGCIMYLP SCFAEKNLSG VSGFIKLQTP DGRQWPVRCL YKVGRAKLSQ 300 GWYEFCLENN LGEGDVCVFE LLRMREIVLK VTMFRVMEEG GRMANPNPTG TMNPPPLRSV 360 TQIKLIRN

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MIRDELSGVA TLTVPDGHVW RVGLRKVDNK FWFEDGWHGF LEHYSIRVGY LLVFRYEGNS  60
AFCVFIFNLN TSEINYQSAA LGGNQRNNYS IQNRIFEELE DYDIPEAIPS NQSMNSGSLR  120
NKLFGDEWNP HQSKSASTLQ AEYLSTRDIG VQFSAMEVKK SADEVRFQNL GDDVHRIKKS  180
GGKKRKPDSS EHHPSSAHSE DLGDIRFRFY ESASARKRTV TAEERERAIN SAKAFEPGNP  240
FCRVVLRPSY LYRGCIMYLP SCFAEKNLSG VSGFIKLQTP DGRQWPVRCL YKVGRAKLSQ  300
GWYEFCLENN LGEGDVCVFE LLRMREIVLK VTMFRVMEEG GRMANPNPTG TMNPPPLRSV  360
TQIKLIRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-122	B3 family protein