PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943971.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family YABBY
Protein Properties Length: 176aa    MW: 19553.2 Da    PI: 9.4177
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943971.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY226.66.4e-7061665169
           YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 
                      ++e+vCyv+CnfCntilavsvP + +f++vtvrCGhC++llsvn+  + q+l+ ++   + ++++++   ++ +++  s  ++++s+s+ ++  
  XP_022943971.1   6 MAPERVCYVHCNFCNTILAVSVPCNNMFTLVTVRCGHCSNLLSVNMGASLQVLPPQDS--HPGNKQQQVSGGDWSKDRGSSSSSSSSSSKCTKIA 98 
                     689***************************************************9997..33333333333333333333333333333333443 PP

           YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169
                     +l ++ +++  r+pp irPPek+qrvPsaynrfikeeiqrika+nPdishreafs+aaknWah+P+i  g
  XP_022943971.1  99 SL-DSAERDQHRIPP-IRPPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNWAHYPHIRCG 166
                     34.344455566677.9*************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MSLEMMAPER VCYVHCNFCN TILAVSVPCN NMFTLVTVRC GHCSNLLSVN MGASLQVLPP  60
QDSHPGNKQQ QVSGGDWSKD RGSSSSSSSS SSKCTKIASL DSAERDQHRI PPIRPPEKKQ  120
RVPSAYNRFI KEEIQRIKAN NPDISHREAF STAAKNWAHY PHIRCGQKVD GNKQTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.18e-66YABBY family protein