PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943973.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family YABBY
Protein Properties Length: 174aa    MW: 19357.9 Da    PI: 9.6547
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943973.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY210.27.2e-6561645169
           YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 
                      ++e+vCyv+CnfCntilavsvP + +f++vtvrCGhC++llsvn+  + q+l+ ++    + ++++    ++ +++  s  ++++s+s+ ++  
  XP_022943973.1   6 MAPERVCYVHCNFCNTILAVSVPCNNMFTLVTVRCGHCSNLLSVNMGASLQVLPPQDSHPGNKQQQVSG--GDWSKDRGSSSSSSSSSSKCTKIA 98 
                     689***************************************************999733333333333..333333333333333333333333 PP

           YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169
                     +l+ + +++  r+pp ir  +k+qrvPsaynrfikeeiqrika+nPdishreafs+aaknWah+P+i  g
  XP_022943973.1  99 SLD-SAERDQHRIPP-IR--QKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNWAHYPHIRCG 164
                     343.34455566667.44..6*********************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MSLEMMAPER VCYVHCNFCN TILAVSVPCN NMFTLVTVRC GHCSNLLSVN MGASLQVLPP  60
QDSHPGNKQQ QVSGGDWSKD RGSSSSSSSS SSKCTKIASL DSAERDQHRI PPIRQKKQRV  120
PSAYNRFIKE EIQRIKANNP DISHREAFST AAKNWAHYPH IRCGQKVDGN KQTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.12e-61YABBY family protein