PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022943974.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

YABBY

Protein Properties

Length: 153aa MW: 16926 Da PI: 10.2886

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022943974.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	183.5	1.2e-56	1	143	23	169
YABBY 23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvir 117 +vsvP + +f++vtvrCGhC++llsvn+ + q+l+ ++ + ++++++ ++ +++ s ++++s+s+ ++ +l ++ +++ r+pp ir XP_022943974.1 1 MVSVPCNNMFTLVTVRCGHCSNLLSVNMGASLQVLPPQDS--HPGNKQQQVSGGDWSKDRGSSSSSSSSSSKCTKIASL-DSAERDQHRIPP-IR 91 59*********************************9997..3333333333333333333333333333333344334.344455566677.9 PP YABBY 118 PPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 PPek+qrvPsaynrfikeeiqrika+nPdishreafs+aaknWah+P+i g XP_022943974.1 92 PPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNWAHYPHIRCG 143 ************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MVSVPCNNMF TLVTVRCGHC SNLLSVNMGA SLQVLPPQDS HPGNKQQQVS GGDWSKDRGS 60 SSSSSSSSSK CTKIASLDSA ERDQHRIPPI RPPEKKQRVP SAYNRFIKEE IQRIKANNPD 120 ISHREAFSTA AKNWAHYPHI RCGQKVDGNK QTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	2e-53	YABBY family protein