PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944064.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 218aa    MW: 24277.3 Da    PI: 6.3004
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944064.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.0008589108221
                     EETTTTEEESSHHHHHHHHH CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
                     +C+ Cgk+F ++  L  H+r
  XP_022944064.1  89 PCTECGKTFWSWKALFGHMR 108
                     5******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MSTKTTPPPS FYSFTSNSLP IMDSPSHSLF PFTVFPPPSP SHSSLPPPNS RRKRTKFIKP  60
TAAPLHSPST PKSKHAKKPD PTAPKITRPC TECGKTFWSW KALFGHMRCH PERQWRGINP  120
PPNFRRSTAT DEDHEIAACL IMLANGPNAI DPTEAVTETD GDCRENQELT ALVFEQIDDD  180
DDDHGYLDLN LPPPMEDIEE RSSSYCSGIV LDLRLGPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.14e-38C2H2 family protein