PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944071.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 242aa MW: 27897.4 Da PI: 6.315

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944071.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.2	1.9e-18	24	71	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grW++eEde+l +v+++G+ +W++I++ g+ R++k+c++rw +yl XP_022944071.1 24 KGRWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYL 71 79********************************************97 PP
2	Myb_DNA-binding	52.3	1.3e-16	77	121	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ +eEd+ ++++ + lG++ W++Ia++++ gRt++++k++w++ XP_022944071.1 77 RGNFQKEEDQTILRLQATLGNR-WSAIAAHLP-GRTDNDIKNHWHTN 121 899*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MAGRKQSNQG CIKRRKRGFV WPSKGRWSKE EDEKLRAYVT KYGSWNWRLI PKFAGLSRCG 60 KSCRLRWMNY LAPDIKRGNF QKEEDQTILR LQATLGNRWS AIAAHLPGRT DNDIKNHWHT 120 NLKKLLDQNP SNTEVEEAAA SSCSELRIRE EEEGEELDET LFVLNSDMAT PELAAKHEGM 180 NFGETETWVV GLNAEHSMEL GGNLWTDPFV LEDPLSLDNN PTHVPMDLLQ HYEMFPPTHF 240 TQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	7e-47	MYB family protein