PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944108.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 194aa    MW: 22196 Da    PI: 6.6886
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944108.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.73.1e-061391655
                    HHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 16 iNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    ++s +++L +llP+     +   ls  +  e+A++YIksL+
  XP_022944108.1  1 MKSLYSKLNSLLPThH--SNELPLSVLDQIEEAIKYIKSLE 39
                    6899**********66..46677****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MKSLYSKLNS LLPTHHSNEL PLSVLDQIEE AIKYIKSLEL KLKKDEEKKE RFTRRSSSSS  60
YMAPTRSRNR NGPELRIKEM GSAVEVVLST GLEEDRFIFY EIIHIFYEER AEIVNVSYSV  120
VGNSVLYSLY AEIEDVVYEF GATKPTERIK RLVYGWENDA EMKAAGSSSS HGGIRRPGNG  180
PSTCSDNQFY SHWI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-07bHLH family protein