PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944186.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 841aa    MW: 91885.5 Da    PI: 6.0597
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944186.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.51.1e-182683457
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022944186.1 26 YVRYTSEQVEALERVYAECPKPSSLRRQQLVRECpilsNIEPKQIKVWFQNRRCREKQ 83
                    5789****************************************************97 PP
2START1556.2e-491653722204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +f+ s+++ g a+ra+g+v  ++    +e+l+d++ W +++++ e+      g  g+++l 
  XP_022944186.1 165 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLESS-KIAEILKDRPSWFRDCRSLEVFTMFPAGngGTIELV 258
                     7899******************************************************.7777777777***********999999999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++ +a+++l+p Rdf+++Ry+ +l+ g++v++++S++     p+    +++vRae+lpSg+li+p+++g+s +++v+h +l+++ ++++lr+l+
  XP_022944186.1 259 YTQVYAPTTLAPaRDFWTLRYTTTLENGSLVVCERSLSGSGAGPSaaaAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWNVPEVLRPLY 353
                     **************************************99999988999********************************************** PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     +s+ + ++k++ a+l++ +
  XP_022944186.1 354 ESSKVVAQKMTIAALRYIR 372
                     **************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 841 aa     Download sequence    
MAMAIAHHRE SSSGSITRHL DSTGKYVRYT SEQVEALERV YAECPKPSSL RRQQLVRECP  60
ILSNIEPKQI KVWFQNRRCR EKQRKEASRL QTVNRKLNAM NKLLMEENDR LQKQVSQLVC  120
ENGFMRQQLQ TVPAAATTDA SCDSVVTTPQ PSRRDANNAA GLLSIAEETL AEFLSKATGT  180
AVDWVQMPGM KPGPDSVGIF AISQSCGGVA ARACGLVSLE SSKIAEILKD RPSWFRDCRS  240
LEVFTMFPAG NGGTIELVYT QVYAPTTLAP ARDFWTLRYT TTLENGSLVV CERSLSGSGA  300
GPSAAAAAQF VRAEMLPSGY LIRPCEGGGS IIHIVDHLNL EAWNVPEVLR PLYESSKVVA  360
QKMTIAALRY IRQIAQETSG EVVYGLGRQP AVLRTFSQRL SRGFNDAVNG FNDNGWSLIN  420
CEGAEDVVLA VNSTKNFGTT SNPANSLTYP GGVLCAKASM LLQNVSPAVL VRFLREHRSE  480
WADFNIDAYS AATLKANSYA YPGMRPTRFT GSQIIMPLGH TIENEELLEV IRLEGHPMVQ  540
EDAFVSRDIH LLQICSGIDE NAVGACSELI FAPIDEMFPD DAPLLPSGFR IIPLDSRSSD  600
AKGSQRTLDL TSSLEVGCGT SNAAGDASSS QSSRSVLTIA FQFPFESSMQ DNVTNMAHQY  660
VRSVISSVQR VAMAISPSGG SPALGPKLSP GSPEALTLAH WICKSYSFQL GSELIRSDSL  720
ENESVLKNLW NHQDAILCCS LKALPVFLFA NQSGLDMLET TLVALQDITL DKIFDESGRK  780
ALCSDFPKLM QQGFAYLPGG ICASTMGRHV SYEQAIAWKV LEADETTVHC LAFSFINWSF  840
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein