PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944246.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family DBB
Protein Properties Length: 215aa    MW: 23152.2 Da    PI: 6.3798
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944246.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box25.52.6e-08342437
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                     +C+ ++++e++ fC +++  lC  C  + H+       H
  XP_022944246.1  3 IRCDVCNKEEASVFCPSDEAALCSACDHHVHRAnklaekH 42
                    58*****************************766666666 PP
2zf-B_box23.89.6e-085694238
        zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg...Ht 38
                    +++ C+ ++  ++ lfC +++  lC++C   +H g   Ht
  XP_022944246.1 56 SPPSCDICQVRRAFLFCLEDRAILCRECDIPIH-GaseHT 94
                    5789*****999********************9.557765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MKIRCDVCNK EEASVFCPSD EAALCSACDH HVHRANKLAE KHSRFTLLRS TPTGNSPPSC  60
DICQVRRAFL FCLEDRAILC RECDIPIHGA SEHTQKHSRF LLTGVKVSPS PATSSSSSTV  120
SGGGSDESAE VTIEAEIGIF KASSRKKAKM GSKGLLRGPL MEDLQAPIVG NFGGMSENGV  180
SFSTSNISEY LESLPGWCVE EFLDSSCVAD VFCKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75540.19e-57DBB family protein