PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944296.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 247aa    MW: 27399.8 Da    PI: 6.9355
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944296.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.4e-173382255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     + GVr+++ +g+WvAeI+d       +  r +lg+f taeeAa a+++a++ l+g
  XP_022944296.1 33 SFVGVRQRP-SGKWVAEIKDtT-----HdIRMWLGTFKTAEEAATAYDEAARLLRG 82
                    689******.7*********33.....47***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MQMEGSVEKQ QHKEVSVSGS KVGKCKDRSR RCSFVGVRQR PSGKWVAEIK DTTHDIRMWL  60
GTFKTAEEAA TAYDEAARLL RGANTRTNFA THLKSTPALS FKIRNLLNQK ISLKRSSSKT  120
SPTKLGPITE IEGAHSGLSF STATNQEIHK TFDNADWSSA CSGEVEVLGL RQFSHSWWHL  180
PLGLNLEMDE PPDPLLTHQD RQVAEMSCDS EQLDLTSIPM CAVNGMSEYL GTTYDAFDSV  240
GQIFCPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-28ERF family protein