PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944347.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GATA

Protein Properties

Length: 523aa MW: 58861.8 Da PI: 6.3548

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944347.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	34.1	3.7e-11	28	54	9	35
GATA 9 TplWRrgpdgnktLCnaCGlyyrkkgl 35 TplWR+gp ++ LCnaCG ++r kg+ XP_022944347.1 28 TPLWRNGPPDKPVLCNACGSRWRTKGS 54 ******55555*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MFELISELHQ RKLCFNESHI VSPCNAGTPL WRNGPPDKPV LCNACGSRWR TKGSLANYTP 60 LHARADPDEY DDKRLSRLKN SSVYKNKEVK LLKRKHYQDH GVVVGVIPDH AQSFHKAVDE 120 DTSNRSSSGS AISNSESCAQ FGGADGSDLT GPSQSTAWES MVPSRKRTCV DRPKSTAVEK 180 LTKDLYTILR EQKSYFSGSS EEDLLFESET PMVSVEIGHG SILMRHPSSI AREEESEASS 240 ISIDHKHFSV NEAYSESSIV PSTLGIGRKH SNGQAFLQEQ IKKDRPQSEK VQALGNHNSP 300 LCNIDLTVIL NFREFTKQLT CEDQRELMKY LPSVDTEELP DSLNSMFESP QFKENLNSFK 360 QLLTEGVFDF SFPGAKREDC KTLSRLVLWD LSKSKWVEQY DRLKKCSTSF VDDKRLLDGQ 420 NKKFSETRIT MTSPRRVTTK TSVESKELVD DSFCFSPRSL FALPSDGSSF TLESLHFDED 480 SFDQDLLLDV RSNSSFPQAE LLSFGGEQAS NSSSSINLRL MHR

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MFELISELHQ RKLCFNESHI VSPCNAGTPL WRNGPPDKPV LCNACGSRWR TKGSLANYTP  60
LHARADPDEY DDKRLSRLKN SSVYKNKEVK LLKRKHYQDH GVVVGVIPDH AQSFHKAVDE  120
DTSNRSSSGS AISNSESCAQ FGGADGSDLT GPSQSTAWES MVPSRKRTCV DRPKSTAVEK  180
LTKDLYTILR EQKSYFSGSS EEDLLFESET PMVSVEIGHG SILMRHPSSI AREEESEASS  240
ISIDHKHFSV NEAYSESSIV PSTLGIGRKH SNGQAFLQEQ IKKDRPQSEK VQALGNHNSP  300
LCNIDLTVIL NFREFTKQLT CEDQRELMKY LPSVDTEELP DSLNSMFESP QFKENLNSFK  360
QLLTEGVFDF SFPGAKREDC KTLSRLVLWD LSKSKWVEQY DRLKKCSTSF VDDKRLLDGQ  420
NKKFSETRIT MTSPRRVTTK TSVESKELVD DSFCFSPRSL FALPSDGSSF TLESLHFDED  480
SFDQDLLLDV RSNSSFPQAE LLSFGGEQAS NSSSSINLRL MHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.2	1e-136	GATA family protein