PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944353.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GATA

Protein Properties

Length: 510aa MW: 57225.9 Da PI: 6.5128

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944353.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	50.1	3.7e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ XP_022944353.1 7 CYHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGS 41 **************55555*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MGKQGPCYHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG SLANYTPLHA RADPDEYDDK 60 RLSRLKNSSV YKNKEVKLLK RKHYQDHGVV VGVIPDHAQS FHKAVDEDTS NRSSSGSAIS 120 NSESCAQFGG ADGSDLTGPS QSTAWESMVP SRKRTCVDRP KSTAVEKLTK DLYTILREQK 180 SYFSGSSEED LLFESETPMV SVEIGHGSIL MRHPSSIARE EESEASSISI DHKHFSVNEA 240 YSESSIVPST LGIGRKHSNG QAFLQEQIKK DRPQSEKVQA LGNHNSPLCN IDLTVILNFR 300 EFTKQLTCED QRELMKYLPS VDTEELPDSL NSMFESPQFK ENLNSFKQLL TEGVFDFSFP 360 GAKREDCKTL SRLVLWDLSK SKWVEQYDRL KKCSTSFVDD KRLLDGQNKK FSETRITMTS 420 PRRVTTKTSV ESKELVDDSF CFSPRSLFAL PSDGSSFTLE SLHFDEDSFD QDLLLDVRSN 480 SSFPQAELLS FGGEQASNSS SSINLRLMHR

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MGKQGPCYHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG SLANYTPLHA RADPDEYDDK  60
RLSRLKNSSV YKNKEVKLLK RKHYQDHGVV VGVIPDHAQS FHKAVDEDTS NRSSSGSAIS  120
NSESCAQFGG ADGSDLTGPS QSTAWESMVP SRKRTCVDRP KSTAVEKLTK DLYTILREQK  180
SYFSGSSEED LLFESETPMV SVEIGHGSIL MRHPSSIARE EESEASSISI DHKHFSVNEA  240
YSESSIVPST LGIGRKHSNG QAFLQEQIKK DRPQSEKVQA LGNHNSPLCN IDLTVILNFR  300
EFTKQLTCED QRELMKYLPS VDTEELPDSL NSMFESPQFK ENLNSFKQLL TEGVFDFSFP  360
GAKREDCKTL SRLVLWDLSK SKWVEQYDRL KKCSTSFVDD KRLLDGQNKK FSETRITMTS  420
PRRVTTKTSV ESKELVDDSF CFSPRSLFAL PSDGSSFTLE SLHFDEDSFD QDLLLDVRSN  480
SSFPQAELLS FGGEQASNSS SSINLRLMHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-148	GATA family protein