PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944398.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 240aa    MW: 27060.2 Da    PI: 6.9494
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944398.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.6e-1098145455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  XP_022944398.1  98 SHSLAERARREKISKRMKYLQNLVPGC----NKITGKAGMLDEIINYVQSLQ 145
                     8**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MFAAETTVSE TQTGRVKWRR TDGDCRSLCS VSTPASRVEH FEDLMAAGGW PELRNNRSGS  60
RNQKRKTETS KQSSKDCKEV QKLDYVHVRA RRGQATDSHS LAERARREKI SKRMKYLQNL  120
VPGCNKITGK AGMLDEIINY VQSLQQQVEF LSMNLAALNH EFDLVNVHDL FVEQVFPTIE  180
ISPETTNYSS NFNKLEVGSS SSSLTIPETS FTHFEHSSTW GGDLQSLHGM SFEEEGPPLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.11e-53bHLH family protein