PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944445.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NF-YB

Protein Properties

Length: 238aa MW: 26158 Da PI: 6.67

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944445.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	168.9	6.2e-53	82	178	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqd+++Pianv+rim+++lP++akis+daket+qecvse+isf+t+ea+++cqre+rkt++++d+lwa+++lGf+dy+epl+v+l++yre e+ XP_022944445.1 82 VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESES 176 69*******************************************************************************************99 PP NF-YB 96 ek 97 ++ XP_022944445.1 177 DR 178 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MECGGAAGGR DGFHSYRRQQ PKPTSALNVL LTTNKSSSAN NTHNSNHQQS NSRNVAANSP 60 VTGSIPASIA ATNNEQSQQC IVREQDQYMP IANVIRIMRR ILPSHAKISD DAKETIQECV 120 SEYISFITGE ANERCQREQR KTVTAEDVLW AMGKLGFDDY IEPLTVFLNR YRESESDRMR 180 TEPILRRNVD YGPQVGMVTP YGQTFQIGHV PIGMFDAMGG YYDGGGNGGS SSGNGSQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	5e-66	NF-YB family protein