PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944465.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 419aa MW: 45673.4 Da PI: 8.402

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944465.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	81.8	5.9e-26	152	196	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e+ XP_022944465.1 152 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVET 196 79****************************************986 PP
2	QLQ	44.5	4.7e-16	80	114	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +F+aaQ q+L+ Q+l+++y++a++ vPpeLl i+ XP_022944465.1 80 YFSAAQRQELELQALIFRYMLAGAAVPPELLHTIK 114 7*****************************98886 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MDFHLKQCRE QEESEEQHSA KISKFFLQHP QSSVSSVSSV SSVLPLFVSD SNNSSKTSSI 60 LSPFPDSTPS ANTLPRMWGY FSAAQRQELE LQALIFRYML AGAAVPPELL HTIKKSLLSS 120 STPFFLHHPL QHFPHYPTSL LQAGYWGRAA MDPEPGRCRR TDGKKWRCSR DVVAGQKYCE 180 RHMHRGRNRS RKPVETATIN PSTTTSTAGA SGGGGGCSLS SHTNRVVGGG GRPFLAVESG 240 NYFSLSGQTP SVDLLHLNQR SCSDSLSEHK NFYESHKEAG AGDAKSDSHI LRHFFDDWPR 300 SNNNGSDNVT QKMKSTSTST TSLSISIPEN PSSSSDVSLK LSTGGSSDQG IGHHIHQDGN 360 SEREHTHLNW AAGWAATQMA SMGGPLAEVL RSTNNNSSPT SMLHQLQRAT NSEASYIST

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MDFHLKQCRE QEESEEQHSA KISKFFLQHP QSSVSSVSSV SSVLPLFVSD SNNSSKTSSI  60
LSPFPDSTPS ANTLPRMWGY FSAAQRQELE LQALIFRYML AGAAVPPELL HTIKKSLLSS  120
STPFFLHHPL QHFPHYPTSL LQAGYWGRAA MDPEPGRCRR TDGKKWRCSR DVVAGQKYCE  180
RHMHRGRNRS RKPVETATIN PSTTTSTAGA SGGGGGCSLS SHTNRVVGGG GRPFLAVESG  240
NYFSLSGQTP SVDLLHLNQR SCSDSLSEHK NFYESHKEAG AGDAKSDSHI LRHFFDDWPR  300
SNNNGSDNVT QKMKSTSTST TSLSISIPEN PSSSSDVSLK LSTGGSSDQG IGHHIHQDGN  360
SEREHTHLNW AAGWAATQMA SMGGPLAEVL RSTNNNSSPT SMLHQLQRAT NSEASYIST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	2e-59	GRF family protein