PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944557.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YC
Protein Properties Length: 217aa    MW: 24644.7 Da    PI: 9.8043
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944557.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC47.73.4e-15108199899
           NF-YC   8 kqiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                     ++ e++++ k  ++P+ rikki++ ++   +i  ea  l+ ka e+f++++   ++  + + ++++l    ++++v + + +dfl d vp++
  XP_022944557.1 108 EEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEK 199
                     457788888999************9999999**********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MASSKKSSSE AKSKEAGTSK PAPNNKTHNN NARTIDKVYS KKKKVSNSNK HTSNGSVKEN  60
EVLPISAPGD AEEDRAETTS KSPNTSKSKK VKRNRGKKEQ NGYVEEEEEA EEEAEEKIYK  120
FPMNRIKKIM RDENSDLRIN QEALFLVNKA TEMFLVQFCK DAYACCAQDR KKSLAYKHLS  180
SVVCKRKRYD FLSDFVPEKL KFEDALKERS MAESGKD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170188RKKSLAYKHLSSVVCKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.15e-34NF-YC family protein