PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944558.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YC
Protein Properties Length: 179aa    MW: 20222.7 Da    PI: 9.8965
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944558.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC29.91.2e-09108170870
           NF-YC   8 kqiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenk 70 
                     ++ e++++ k  ++P+ rikki++ ++   +i  ea  l+ ka e+f++++   ++  + + +
  XP_022944558.1 108 EEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDR 170
                     457788888999************9999999******************99877776655544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MASSKKSSSE AKSKEAGTSK PAPNNKTHNN NARTIDKVYS KKKKVSNSNK HTSNGSVKEN  60
EVLPISAPGD AEEDRAETTS KSPNTSKSKK VKRNRGKKEQ NGYVEEEEEA EEEAEEKIYK  120
FPMNRIKKIM RDENSDLRIN QEALFLVNKA TEMFLVQFCK DAYACCAQDR KKSLAYKHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.14e-20NF-YC family protein