PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944560.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 350aa MW: 39189 Da PI: 6.1274

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944560.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	156.8	9e-49	25	151	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrF+P+deel+ +yLkkk++g++ ++ +vi+e++i+k+ePwdLp k + +++ew+fFs+r +ky++g++++rat+ gyWkatgk+++v+s XP_022944560.1 25 MFPGFRFSPKDEELILFYLKKKLQGSDDSV-DVISEIEICKFEPWDLPGKSRIpSDNEWFFFSPRGRKYPNGTQNKRATELGYWKATGKERNVKS 118 579**********************999.99***********543333789********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e +g+k+tLvf+ grap+ge+t+W+mhey l XP_022944560.1 119 -GSEIIGTKRTLVFHLGRAPTGERTEWIMHEYCL 151 .9****************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MESKGKGAMG GVSREAEMSM AALSMFPGFR FSPKDEELIL FYLKKKLQGS DDSVDVISEI 60 EICKFEPWDL PGKSRIPSDN EWFFFSPRGR KYPNGTQNKR ATELGYWKAT GKERNVKSGS 120 EIIGTKRTLV FHLGRAPTGE RTEWIMHEYC LNDTSQDSNS MVVCRLRKNN DFRRNNSDKA 180 GSSKVQGSGE DGDGGVGQKV GGESDRLSKN CSSSFDSHSL EQTDSGIEFR RKETSDPALH 240 ESLSREKGNG EDEELYADLL KDDIITLDDN LLSATHNPTP MIMNFSESEK YTHLPIPTAL 300 ADAEASPFLG NTTRRIKLKK QEHNNVYINL GLLTFLLIIF IVSLHLLCNL

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MESKGKGAMG GVSREAEMSM AALSMFPGFR FSPKDEELIL FYLKKKLQGS DDSVDVISEI  60
EICKFEPWDL PGKSRIPSDN EWFFFSPRGR KYPNGTQNKR ATELGYWKAT GKERNVKSGS  120
EIIGTKRTLV FHLGRAPTGE RTEWIMHEYC LNDTSQDSNS MVVCRLRKNN DFRRNNSDKA  180
GSSKVQGSGE DGDGGVGQKV GGESDRLSKN CSSSFDSHSL EQTDSGIEFR RKETSDPALH  240
ESLSREKGNG EDEELYADLL KDDIITLDDN LLSATHNPTP MIMNFSESEK YTHLPIPTAL  300
ADAEASPFLG NTTRRIKLKK QEHNNVYINL GLLTFLLIIF IVSLHLLCNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	3e-83	NAC family protein