PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944574.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 297aa    MW: 33223.2 Da    PI: 7.1641
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944574.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding445e-141663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l  +    G g+W+ +ar  g+ R++k+c++rw +yl
   XP_022944574.1 16 KGLWSPEEDDKLMTYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYL 63
                     678*******************************************97 PP
2Myb_DNA-binding506.7e-1669112146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E+ l+++++ +lG++ W+ Ia++++ gRt++++k++w++
   XP_022944574.1  69 RGAFSPQEERLIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 112
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MRKPDPAAAR TTKLRKGLWS PEEDDKLMTY MLNNGQGCWS DVARNAGLQR CGKSCRLRWI  60
NYLHPDLKRG AFSPQEERLI IHLHSLLGNR WSQIAARLPG RTDNEIKNFW NSTIKKRLKN  120
LSSTPSPNTS SAGSPSDNSK SIPFGGLLST QDYQQQQQQG LIDYPIYASD PSPSIIALDP  180
FPTFTAEAEP GFFLEHDSFF NNLPVLQRVN TTTVVTTATT AATTLVKEAN HGNYLISNIN  240
CLANHNNNTN NNPKIENVNG GVGPNFVHEE FSIGEWDLED LMKDVPSCFP YLNFQVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.19e-71MYB family protein